Honestly, this does not appear to be an osTicket question.
It appears to me to be a how do I use Let'sEncrypt (Win-Acme) on a Windows Server with the IIS 8.0 webserver software.
note: it is my recollection that 2012 comes with IIS 8.0, and 2012 R2 comes with IIS 8.5, but please correct me if I am wrong.
If it were me (and I have tried to do this on Windows and gave up a couple years ago now) I would google something like win-acme iis 8.0
.
The first hit in my search is:
https://miketabor.com/how-to-install-a-lets-encrypt-ssl-cert-on-microsoft-iis/
While I have not used this article personally it looks pretty well written and includes screen shots. Once you install it and configure your server to use it you simply go to the Admin panel -> Settings -> System and change your Helpdesk URL from http:// to https://
Please let us know how you make out or if we can be of further assistance.